doc/paper/*.log
doc/paper/*.aux
doc/doxygen/
doc/sphinx/
bin/
lib/
share/
include/
obj/
cpp/
pre-build.log
compile_commands.json
src/vg_git_version.hpp
src/vg_environment_version.hpp
*.o
vg
*.a
*~
*.swp
*.dot
*.fa.fai
test/build_graph
test/.*
test/*.lcp
test/*/*.lcp
test/**/*.index/
test/wiki-data/mock-hs37d5/graphs/
test/wiki-data/mock-hs37d5/indexes/
test/wiki-data/mock-hs37d5/logs/
trash
src/*.gch
.vscode
# Temporary subcommand used for debugging something
debug_main.cpp
# Ignore a bunch of files people might dump in the root when testing
/*.vg
/*.gcsa
/*.xg
/*.html
/*.gam
/*.idx
/*.index
/*.vgpu
/*.png
/*.lcp
/*.json
/*.vcf
/*.vcf.gz
/*.vcf.gz.tbi
/*.pdf
/*.svg
/*.fa
/*.gfa
.vscode/*
.cache/*